Transcript: R06A4.9a.1 pfs-2-202

Description

pre-mRNA 3' end processing protein pfs-2 [Source:NCBI gene (formerly Entrezgene);Acc:175092]

Location

About this transcript

This transcript has 7 exons, is annotated with 38 domains and features and maps to 57 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
R06A4.9a.1	pfs-2-202	2749	809aa	R06A4.9a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PCM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
R06A4.9c.1	pfs-2-201	3047	219aa	R06A4.9c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
R06A4.9b.1	pfs-2-203	1815	604aa	R06A4.9b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,749 bps, Translation length: 809 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: U4PCM1

Version

R06A4.9a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase