Transcript: K04A8.6b.1 dre-1-203

Description

F-box domain-containing protein;F-box protein dre-1 [Source:NCBI gene (formerly Entrezgene);Acc:179045]

Location

Chromosome V: 6,533,990-6,546,491 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 49 domains and features and maps to 69 oligo probes.

Gene

This transcript is a product of gene WBGene00001089 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
K04A8.6b.1	dre-1-203	3069	1022aa	K04A8.6b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AS68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
K04A8.6a.2	dre-1-202	3451	936aa	K04A8.6a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q94251	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
K04A8.6a.1	dre-1-201	3315	936aa	K04A8.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q94251	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,069 bps, Translation length: 1,022 residues

Version

K04A8.6b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: K04A8.6b.1 dre-1-203

Summary

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Transcript: K04A8.6b.1 dre-1-203

Summary

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