Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
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External References
- General identifiers
- Oligo probes
Supporting evidence
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Transcript: F43G6.11.1 hda-5-201

Description

Histone deacetylase domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:174811]

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features and maps to 46 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
F43G6.11.1	hda-5-201	1580	508aa	F43G6.11.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I4I9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,580 bps, Translation length: 508 residues

Version

F43G6.11.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase