Transcript: F41H10.6c.1

Description

Histone deacetylase 6; UBP-type domain-containing protein [Source:NCBI gene;Acc:177316]

Location

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features and maps to 56 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
F41H10.6c.1	-	3005	957aa	F41H10.6c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7LPD8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
F41H10.6b.1	-	2992	955aa	F41H10.6b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q20296	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
F41H10.6a.1	-	2760	863aa	F41H10.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q20296	-
F41H10.6d.1	-	417	138aa	F41H10.6d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G8JYB7	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,005 bps, Translation length: 957 residues

Version

F41H10.6c.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase