Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: F32A6.3c.1 vps-41-202

Description

Vacuolar protein sorting-associated [Source:NCBI gene (formerly Entrezgene);Acc:180800]

Location

About this transcript

This transcript has 13 exons and is annotated with 15 domains and features.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
F32A6.3c.1	vps-41-202	2706	901aa	F32A6.3c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q19954	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
F32A6.3a.1	vps-41-201	2895	759aa	F32A6.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
F32A6.3b.1	vps-41-203	2613	681aa	F32A6.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,706 bps, Translation length: 901 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q19954

Version

F32A6.3c.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase