Transcript: F15A2.6a.1 sad-1-202

Description

Serine/threonine kinase SAD-1 [Source:NCBI gene (formerly Entrezgene);Acc:181471]

Location

About this transcript

This transcript has 16 exons, is annotated with 28 domains and features and maps to 78 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
F15A2.6a.1	sad-1-202	3388	914aa	F15A2.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q19469	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
F15A2.6b.1	sad-1-201	3430	835aa	F15A2.6b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,388 bps, Translation length: 914 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q19469

Version

F15A2.6a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase