Transcript: C44E4.1a.1 ubr-4-201

Description

UBR-type domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:172068]

Location

About this transcript

This transcript has 21 exons, is annotated with 11 domains and features and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
C44E4.1d.1	ubr-4-202	12782	4218aa	C44E4.1d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S4XR36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
C44E4.1a.1	ubr-4-201	12767	4213aa	C44E4.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O01808	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
C44E4.1c	ubr-4-203	13399	No protein	-	A non-coding gene.ncRNA	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 12,767 bps, Translation length: 4,213 residues

Version

C44E4.1a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase