Summary
Sequence
Protein Information
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- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
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Supporting evidence
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Transcript: C26C6.1a.1 pbrm-1-202

Description

Bromo domain-containing protein;HMG box domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:172504]

Location

About this transcript

This transcript has 15 exons and is annotated with 72 domains and features.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
C26C6.1a.1	pbrm-1-202	6001	1883aa	C26C6.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EEY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
C26C6.1b.2	pbrm-1-201	5979	513aa	C26C6.1b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q565A2	-
C26C6.1b.3	pbrm-1-203	2603	513aa	C26C6.1b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q565A2	-
C26C6.1b.1	pbrm-1-204	1954	513aa	C26C6.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q565A2	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 6,001 bps, Translation length: 1,883 residues

Version

C26C6.1a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase