Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
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External References
- General identifiers
- Oligo probes
Supporting evidence
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Transcript: Y94H6A.9d.1 ubxn-2-204

Description

SEP domain-containing protein;UBX domain-containing protein;UBX domain-containing protein 2 [Source:NCBI gene (formerly Entrezgene);Acc:177057]

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features and maps to 34 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y94H6A.9a.1	ubxn-2-201	1158	301aa	Y94H6A.9a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9N2W5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Y94H6A.9d.1	ubxn-2-204	741	246aa	Y94H6A.9d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PBA6	-
Y94H6A.9b.1	ubxn-2-203	582	193aa	Y94H6A.9b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
Y94H6A.9c.1	ubxn-2-202	132	43aa	Y94H6A.9c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PAW3	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 741 bps, Translation length: 246 residues

Version

Y94H6A.9d.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase