Transcript: Y54E10A.11.1 Y54E10A.11-202

Description

E3 ubiquitin-protein ligase listerin [Source:NCBI gene (formerly Entrezgene);Acc:171893]

Location

About this transcript

This transcript has 14 exons, is annotated with 14 domains and features and maps to 63 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y54E10A.11.1	Y54E10A.11-202	4596	1446aa	Y54E10A.11.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q65XX2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Y54E10A.11.2	Y54E10A.11-201	4479	1446aa	Y54E10A.11.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q65XX2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,596 bps, Translation length: 1,446 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q65XX2

Version

Y54E10A.11.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase