Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
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Transcript: T13H2.5a.1 spat-3-201

Description

E3 ubiquitin-protein ligase RING2 homolog spat-3 [Source:NCBI gene (formerly Entrezgene);Acc:259704]

Location

About this transcript

This transcript has 19 exons and is annotated with 47 domains and features.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
T13H2.5a.1	spat-3-201	7651	2476aa	T13H2.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KYH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
T13H2.5b.1	spat-3-202	3279	1092aa	T13H2.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 7,651 bps, Translation length: 2,476 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: H2KYH3

Version

T13H2.5a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase