Transcript: C52E4.2c.1

Description

MIF-like protein mif-2 [Source:NCBI gene;Acc:179638]

Location

Chromosome V: 11,976,877-11,978,404 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features and maps to 52 oligo probes.

Gene

This transcript is a product of gene WBGene00003235 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
C52E4.2a.1	-	581	120aa	C52E4.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q18785	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
C52E4.2a.2	-	478	120aa	C52E4.2a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q18785	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
C52E4.2c.1	-	426	141aa	C52E4.2c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MU38	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
C52E4.2b.1	-	273	90aa	C52E4.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6R8W7	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 426 bps, Translation length: 141 residues

Version

C52E4.2c.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: C52E4.2c.1

Summary

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Transcript: C52E4.2c.1

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