Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
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External references
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ID History
- Gene history

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Gene: pei-2 WBGene00019972

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Description

BTB domain-containing protein;SAM domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:178603]

Location

Chromosome V: 1,018,336-1,023,467 reverse strand.

WBcel235:BX284605.5

About this gene

This gene has 6 transcripts (splice variants) and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
R09A1.2a.1	pei-2-202	1648	381aa	R09A1.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AS98	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
R09A1.2a.2	pei-2-201	1226	381aa	R09A1.2a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AS98	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
R09A1.2b.1	pei-2-206	477	158aa	R09A1.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AVT4	-
R09A1.2c.1	pei-2-205	210	69aa	R09A1.2c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AY27	-
R09A1.2d	pei-2-204	354	No protein	-	A non-coding gene.ncRNA	-	-
R09A1.2e	pei-2-203	223	No protein	-	A non-coding gene.ncRNA	-	-

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Summary

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