Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: shc-1 WBGene00018788

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Description

SHC-transforming protein homolog 1 [Source:NCBI gene (formerly Entrezgene);Acc:3565745]

Location

Chromosome I: 969,088-976,560 reverse strand.

WBcel235:BX284601.5

About this gene

This gene has 9 transcripts (splice variants) and 186 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
F54A5.3a.1	shc-1-203	1624	316aa	F54A5.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TYT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
F54A5.3b.1	shc-1-204	5250	227aa	F54A5.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
F54A5.3b.2	shc-1-202	1750	227aa	F54A5.3b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
F54A5.3b.3	shc-1-201	1407	227aa	F54A5.3b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
F54A5.3g	shc-1-209	4585	No protein	-	A non-coding gene.ncRNA	-	-
F54A5.3c	shc-1-205	1097	No protein	-	A non-coding gene.ncRNA	-	-
F54A5.3d	shc-1-206	1087	No protein	-	A non-coding gene.ncRNA	-	-
F54A5.3f	shc-1-208	947	No protein	-	A non-coding gene.ncRNA	-	-
F54A5.3e	shc-1-207	811	No protein	-	A non-coding gene.ncRNA	-	-

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Summary

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