Protein transport protein sec16 [Source:NCBI gene;Acc:181084]
Chromosome X: 8,287,249-8,294,519 forward strand.
WBcel235:BX284606.5
This gene has 6 transcripts (splice variants) and 361 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| F13B9.1a.1 | - | 5310 | 1632aa | F13B9.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZQ8 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| F13B9.1d.1 | - | 5245 | 1610aa | F13B9.1d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4V0IM30 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F13B9.1b.1 | - | 5242 | 1614aa | F13B9.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95ZV3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F13B9.1c.1 | - | 5230 | 1609aa | F13B9.1c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KZQ9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F13B9.1e.1 | - | 4722 | 1573aa | F13B9.1e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4V0IKE4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F13B9.1f.1 | - | 4710 | 1569aa | F13B9.1f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4V0IKA6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
