Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Comparative Genomics
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Gene: glb-27 WBGene00012178

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Description

Globin family profile domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:189091]

Location

Chromosome II: 8,547,337-8,556,266 reverse strand.

WBcel235:BX284602.5

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
W01C9.5b.1	glb-27-203	1109	280aa	W01C9.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3ATU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
W01C9.5c.1	glb-27-202	1016	260aa	W01C9.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AU27	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
W01C9.5a.1	glb-27-201	911	224aa	W01C9.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q23117	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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