Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: K02C4.3 WBGene00010502

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Description

USP domain-containing protein;putative ubiquitin carboxyl-terminal hydrolase K02C4.3;ubiquitinyl hydrolase 1 [Source:NCBI gene (formerly Entrezgene);Acc:174300]

Location

Chromosome II: 8,080,783-8,086,853 reverse strand.

WBcel235:BX284602.5

About this gene

This gene has 5 transcripts (splice variants), 1 orthologue and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
K02C4.3a.1	K02C4.3-202	4223	1261aa	K02C4.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
K02C4.3c.1	K02C4.3-201	4225	1259aa	K02C4.3c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A131MAU8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
K02C4.3b.1	K02C4.3-203	4214	1256aa	K02C4.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A131MAZ4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
K02C4.3d.1	K02C4.3-204	4206	1258aa	K02C4.3d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A131MBF0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
K02C4.3e.1	K02C4.3-205	861	286aa	K02C4.3e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A131MCC3	-

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Summary

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