VPS9 domain-containing protein [Source:NCBI gene;Acc:3565509]
Chromosome V: 14,784,151-14,815,600 reverse strand.
WBcel235:BX284605.5
This gene has 9 transcripts (splice variants), 1151 orthologues and 2 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| C48G7.3a.1 | - | 6219 | 1890aa | C48G7.3a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5ECF0 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| C48G7.3f.1 | - | 5238 | 1745aa | C48G7.3f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EDQ3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C48G7.3g.1 | - | 4923 | 1640aa | C48G7.3g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EG71 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C48G7.3i.1 | - | 4107 | 1368aa | C48G7.3i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EFI0 | - |
| C48G7.3j.1 | - | 3390 | 934aa | C48G7.3j.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EBS9 | - |
| C48G7.3k.1 | - | 3063 | 1020aa | C48G7.3k.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I7LFF0 | - |
| C48G7.3l.1 | - | 2844 | 947aa | C48G7.3l.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I7J4D1 | - |
| C48G7.3d.1 | - | 2754 | 917aa | C48G7.3d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5ED02 | - |
| C48G7.3h.1 | - | 1989 | 662aa | C48G7.3h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EFE4 | - |
