Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: mdt-8 WBGene00007013

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Description

Mediator of RNA polymerase II transcription subunit 8 [Source:NCBI gene (formerly Entrezgene);Acc:174763]

Location

Chromosome II: 11,527,168-11,533,816 reverse strand.

WBcel235:BX284602.5

About this gene

This gene has 2 transcripts (splice variants) and 212 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y62F5A.1a.1	mdt-8-201	1077	325aa	Y62F5A.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Y62F5A.1b.1	mdt-8-202	1079	297aa	Y62F5A.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9U1W2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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