UBA_e1_C domain-containing protein [Source:NCBI gene;Acc:177855]
Chromosome IV: 9,989,671-9,994,945 reverse strand.
WBcel235:BX284604.4
This gene has 6 transcripts (splice variants), 101 orthologues and 7 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| C47E12.5a.1 | - | 3623 | 1113aa | C47E12.5a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q27481 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| C47E12.5b.2 | - | 3622 | 1028aa | C47E12.5b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3S1J5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C47E12.5b.1 | - | 3406 | 1028aa | C47E12.5b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3S1J5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C47E12.5b.3 | - | 3364 | 1028aa | C47E12.5b.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3S1J5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C47E12.5c.1 | - | 3339 | 1112aa | C47E12.5c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C1P636 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| C47E12.5b.4 | - | 3324 | 1028aa | C47E12.5b.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3S1J5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
