LLGL domain-containing protein [Source:NCBI gene;Acc:172209]
Chromosome I: 5,546,118-5,561,689 forward strand.
WBcel235:BX284601.5
This gene has 7 transcripts (splice variants), 505 orthologues and 1 paralogue.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| M01A10.2h.1 | - | 4187 | 1246aa | M01A10.2h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AR90 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| M01A10.2g.1 | - | 3934 | 1250aa | M01A10.2g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AWL6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| M01A10.2f.1 | - | 3898 | 1133aa | M01A10.2f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EE26 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| M01A10.2e.1 | - | 3828 | 1128aa | M01A10.2e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q14DX2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| M01A10.2a.1 | - | 3823 | 1124aa | M01A10.2a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q49HI3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| M01A10.2i.1 | - | 3768 | 1255aa | M01A10.2i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3ATN9 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| M01A10.2b.1 | - | 939 | 193aa | M01A10.2b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8WFN4 | - |
