Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
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Gene: atx-3 WBGene00006446

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Description

Ataxin-3 homolog [Source:NCBI gene (formerly Entrezgene);Acc:180049]

Location

Chromosome V: 15,575,498-15,577,445 reverse strand.

WBcel235:BX284605.5

About this gene

This gene has 3 transcripts (splice variants) and 266 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
F28F8.6.3	atx-3-203	1652	317aa	F28F8.6.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O17850	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
F28F8.6.1	atx-3-202	1264	317aa	F28F8.6.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O17850	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
F28F8.6.2	atx-3-201	1147	317aa	F28F8.6.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O17850	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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