Heteroous nuclear ribonucleoprotein A1 [Source:NCBI gene;Acc:177101]
Chromosome IV: 3,336,920-3,338,867 reverse strand.
WBcel235:BX284604.4
This gene has 10 transcripts (splice variants), 208 orthologues and 11 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| F42A6.7a.2 | - | 1555 | 346aa | F42A6.7a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q22037 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F42A6.7b.4 | - | 1547 | 309aa | F42A6.7b.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q22037 | - |
| F42A6.7b.1 | - | 1542 | 309aa | F42A6.7b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q22037 | - |
| F42A6.7b.3 | - | 1498 | 309aa | F42A6.7b.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q22037 | - |
| F42A6.7a.1 | - | 1473 | 346aa | F42A6.7a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q22037 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F42A6.7c.1 | - | 1380 | 308aa | F42A6.7c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q22037 | - |
| F42A6.7b.2 | - | 1371 | 309aa | F42A6.7b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q22037 | - |
| F42A6.7c.2 | - | 1322 | 308aa | F42A6.7c.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q22037 | - |
| F42A6.7d.1 | hrpa-1-210 | 1223 | 347aa | F42A6.7d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q22037 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| F42A6.7d.2 | - | 1187 | 347aa | F42A6.7d.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q22037 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
