Ricin B-type lectin domain-containing protein; putative N-acetylgalactosaminyltransferase 6 [Source:NCBI gene;Acc:175558]
Chromosome III: 4,324,280-4,331,228 reverse strand.
WBcel235:BX284603.4
This gene has 6 transcripts (splice variants).
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| H38K22.5a.2 | - | 2698 | 618aa | H38K22.5a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O61394 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| H38K22.5b.2 | - | 2669 | 617aa | H38K22.5b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O61394 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| H38K22.5a.1 | - | 2422 | 618aa | H38K22.5a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O61394 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| H38K22.5b.1 | - | 2394 | 617aa | H38K22.5b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O61394 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| H38K22.5c.1 | - | 2142 | 562aa | H38K22.5c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O61394 | - |
| H38K22.5d.1 | - | 933 | 141aa | H38K22.5d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C0Z3L2 | - |
