SAM_3 domain-containing protein; SH3 domain-containing protein [Source:NCBI gene;Acc:178411]
Chromosome IV: 14,879,484-14,900,653 forward strand.
WBcel235:BX284604.4
This gene has 12 transcripts (splice variants) and 713 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| Y57G11C.24g.1 | - | 3096 | 917aa | Y57G11C.24g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5ED33 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y57G11C.24i.1 | - | 3056 | 942aa | Y57G11C.24i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A061ACP8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y57G11C.24a.1 | - | 2848 | 862aa | Y57G11C.24a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O18250 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y57G11C.24h.1 | - | 2847 | 740aa | Y57G11C.24h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EFE0 | - |
| Y57G11C.24n.1 | - | 2832 | 943aa | Y57G11C.24n.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4V6M3U0 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| Y57G11C.24o.1 | - | 2757 | 918aa | Y57G11C.24o.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4V0IJW4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y57G11C.24j.1 | - | 2664 | 887aa | Y57G11C.24j.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A061ADW6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y57G11C.24k.1 | - | 2613 | 870aa | Y57G11C.24k.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A061ACM2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y57G11C.24d.1 | - | 2538 | 845aa | Y57G11C.24d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7YTG1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Y57G11C.24e.1 | eps-8-210 | 2260 | 665aa | Y57G11C.24e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7YTG2 | - |
| Y57G11C.24l.1 | eps-8-211 | 2073 | 690aa | Y57G11C.24l.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A061AJ42 | - |
| Y57G11C.24m.1 | eps-8-212 | 540 | 179aa | Y57G11C.24m.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A061AKT4 | - |
