Putative cuticle collagen 99 [Source:NCBI gene;Acc:185112]
Chromosome IV: 137,974-147,919 reverse strand.
WBcel235:BX284604.4
This gene has 17 transcripts (splice variants), 146 orthologues and 110 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| F29C4.8a.1 | - | 2910 | 707aa | F29C4.8a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O76368 | - |
| F29C4.8e.1 | - | 2853 | 692aa | F29C4.8e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PRZ7 | - |
| F29C4.8f.1 | - | 2717 | 668aa | F29C4.8f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0F6YQF6 | - |
| F29C4.8j.1 | col-99-210 | 2208 | 735aa | F29C4.8j.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MCY1 | - |
| F29C4.8k.1 | - | 2172 | 723aa | F29C4.8k.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MBL6 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| F29C4.8n.1 | - | 2163 | 720aa | F29C4.8n.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MBJ3 | - |
| F29C4.8b.1 | col-99-216 | 2151 | 716aa | F29C4.8b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O76368 | - |
| F29C4.8l.1 | - | 2136 | 711aa | F29C4.8l.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MB32 | - |
| F29C4.8o.1 | - | 2127 | 708aa | F29C4.8o.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MCG3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F29C4.8m.1 | - | 2100 | 699aa | F29C4.8m.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MAZ6 | - |
| F29C4.8p.1 | - | 2091 | 696aa | F29C4.8p.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MD72 | - |
| F29C4.8c.1 | col-99-215 | 2088 | 695aa | F29C4.8c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PC95 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F29C4.8q.1 | col-99-211 | 2055 | 684aa | F29C4.8q.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MBK4 | - |
| F29C4.8d.1 | col-99-214 | 2052 | 683aa | F29C4.8d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PMN6 | - |
| F29C4.8h.1 | col-99-212 | 2043 | 680aa | F29C4.8h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MBQ9 | - |
| F29C4.8g.1 | col-99-213 | 2016 | 671aa | F29C4.8g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MBJ4 | - |
| F29C4.8i.1 | col-99-217 | 1971 | 656aa | F29C4.8i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A131MCS7 | - |
