Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
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Genetic Variation
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Gene: arx-3 WBGene00000201

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Description

Actin-related protein 2/3 complex subunit [Source:NCBI gene (formerly Entrezgene);Acc:3565442]

Location

Chromosome III: 12,052,424-12,058,458 reverse strand.

WBcel235:BX284603.4

About this gene

This gene has 2 transcripts (splice variants) and 597 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y79H2A.6b.1	arx-3-202	1401	375aa	Y79H2A.6b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P6PCS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Y79H2A.6a.1	arx-3-201	1380	368aa	Y79H2A.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9U1R7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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