Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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Molecular interactions
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Supporting evidence
ID History
- Gene history

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Gene: B0281.5 WBGene00015112

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Description

BTB domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:181899]

Location

Chromosome II: 2,299,854-2,300,961 reverse strand.

WBcel235:BX284602.5

About this gene

This gene has 2 transcripts (splice variants), 608 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
B0281.5a.1	B0281.5-201	855	207aa	B0281.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O16612	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
B0281.5b.1	B0281.5-202	735	179aa	B0281.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KY83	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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