Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: emb-9 WBGene00001263

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Description

Collagen alpha-1(IV) chain [Source:NCBI gene (formerly Entrezgene);Acc:176314]

Location

Chromosome III: 9,336,881-9,344,447 reverse strand.

WBcel235:BX284603.4

About this gene

This gene has 2 transcripts (splice variants), 348 orthologues and 110 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
K04H4.1a.1	emb-9-201	5611	1759aa	K04H4.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P17139	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
K04H4.1b.1	emb-9-202	4509	1502aa	K04H4.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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