Transcript: ENSBTAT00000019617.7 LRWD1-203

Description

leucine rich repeats and WD repeat domain containing 1 [Source:VGNC Symbol;Acc:VGNC:31048]

Location

Primary_assembly 25: 34,581,490-34,588,465 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 23 domains and features, is associated with 2092 variant alleles and maps to 13 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000014742.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000019617.7	LRWD1-203	2691	739aa	ENSBTAP00000019617.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N397	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000097361.1	LRWD1-202	2406	693aa	ENSBTAP00000078494.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S0J1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000110954.1	LRWD1-201	2397	692aa	ENSBTAP00000079554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S890	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,691 bps, Translation length: 739 residues

Version

ENSBTAT00000019617.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSBTAT00000019617.7 LRWD1-203

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Transcript: ENSBTAT00000019617.7 LRWD1-203

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