Transcript: ENSBTAT00000061357.4 SH3PXD2A-205

Description

SH3 and PX domains 2A [Source:VGNC Symbol;Acc:VGNC:55967]

Location

Primary_assembly 26: 24,168,638-24,362,726 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 53 domains and features and is associated with 10292 variant alleles.

Gene

This transcript is a product of gene ENSBTAG00000044153.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000120825.1	SH3PXD2A-202	4602	1133aa	ENSBTAP00000091119.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T5T6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000108711.1	SH3PXD2A-203	4557	1118aa	ENSBTAP00000075157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RZD8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000119720.1	SH3PXD2A-204	4518	1105aa	ENSBTAP00000077878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RWQ8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000126391.1	SH3PXD2A-201	4371	1112aa	ENSBTAP00000088813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9STZ6	-
ENSBTAT00000061357.4	SH3PXD2A-205	3375	1095aa	ENSBTAP00000053833.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MF26	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,375 bps, Translation length: 1,095 residues

Version

ENSBTAT00000061357.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSBTAT00000061357.4 SH3PXD2A-205

Summary

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Transcript: ENSBTAT00000061357.4 SH3PXD2A-205

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