Transcript: ENSBTAT00000055230.4 NSMCE1-203

Description

NSE1 homolog, SMC5-SMC6 complex component [Source:VGNC Symbol;Acc:VGNC:32279]

Location

Primary_assembly 25: 24,804,285-24,840,411 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 2919 variant alleles and maps to 11 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000002176.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000067298.2	NSMCE1-202	1288	317aa	ENSBTAP00000056747.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MQS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000055230.4	NSMCE1-203	1191	313aa	ENSBTAP00000051539.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MUB2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000074856.2	NSMCE1-201	872	274aa	ENSBTAP00000071834.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MK45	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,191 bps, Translation length: 313 residues

Version

ENSBTAT00000055230.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000055230.4 NSMCE1-203

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Transcript: ENSBTAT00000055230.4 NSMCE1-203

Summary

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