Transcript: ENSBTAT00000025683.5 PACSIN2-201

Description

protein kinase C and casein kinase substrate in neurons 2 [Source:VGNC Symbol;Acc:VGNC:32543]

Location

About this transcript

This transcript has 11 exons, is annotated with 30 domains and features, is associated with 6257 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000025683.5	PACSIN2-201	3322	486aa	ENSBTAP00000025683.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RMR9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000081769.2	PACSIN2-202	3199	445aa	ENSBTAP00000062405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LY20	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,322 bps, Translation length: 486 residues

Version

ENSBTAT00000025683.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.