Transcript: ENSBTAT00000061280.4 STXBP5-201

Description

syntaxin binding protein 5 [Source:VGNC Symbol;Acc:VGNC:35448]

Location

Primary_assembly 9: 84,506,678-84,661,261 forward strand.

About this transcript

This transcript has 28 exons, is annotated with 38 domains and features, is associated with 5097 variant alleles and maps to 12 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000021107.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000061280.4	STXBP5-201	4306	1151aa	ENSBTAP00000053504.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BNK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000073234.2	STXBP5-203	4220	1136aa	ENSBTAP00000057082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LKT6	-
ENSBTAT00000083985.2	STXBP5-204	4160	1116aa	ENSBTAP00000059562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LW14	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000082509.2	STXBP5-205	4109	1099aa	ENSBTAP00000069753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MKK0	-
ENSBTAT00000093047.1	STXBP5-202	3729	1086aa	ENSBTAP00000086444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SMC8	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 4,306 bps, Translation length: 1,151 residues

Version

ENSBTAT00000061280.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSBTAT00000061280.4 STXBP5-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSBTAT00000061280.4 STXBP5-201

Summary

About Us

Get help

Our sister sites

Follow us