Transcript: ENSBTAT00000025190.6 TRIM47-202

Description

tripartite motif containing 47 [Source:VGNC Symbol;Acc:VGNC:36339]

Location

About this transcript

This transcript has 6 exons, is annotated with 37 domains and features, is associated with 1391 variant alleles and maps to 8 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000082116.2	TRIM47-201	2402	673aa	ENSBTAP00000066256.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MC04	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000025190.6	TRIM47-202	2450	648aa	ENSBTAP00000025190.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BG23	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,450 bps, Translation length: 648 residues

Version

ENSBTAT00000025190.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.