Transcript: ENSBTAT00000019811.7 PHF23-203

Description

PHD finger protein 23 [Source:VGNC Symbol;Acc:VGNC:32823]

Location

Primary_assembly 19: 26,948,834-26,953,225 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 22 domains and features, is associated with 1855 variant alleles and maps to 11 oligo probes.

Gene

This transcript is a product of gene ENSBTAG00000014881.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000019811.7	PHF23-203	1945	400aa	ENSBTAP00000019811.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5D962	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000116144.1	PHF23-201	1901	390aa	ENSBTAP00000079036.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SA45	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000098948.1	PHF23-202	1755	395aa	ENSBTAP00000093559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TBU6	-
ENSBTAT00000100931.1	PHF23-204	649	157aa	ENSBTAP00000102529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TW18	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,945 bps, Translation length: 400 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A5D962

Version

ENSBTAT00000019811.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Upcoming Ensembl Platform Transition

Transcript: ENSBTAT00000019811.7 PHF23-203

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Transcript: ENSBTAT00000019811.7 PHF23-203

Summary

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