Transcript: ENSBTAT00000011251.4 SOCS7-201

Description

suppressor of cytokine signaling 7 [Source:VGNC Symbol;Acc:VGNC:35125]

Location

About this transcript

This transcript has 10 exons, is annotated with 31 domains and features, is associated with 1572 variant alleles and maps to 26 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000011251.4	SOCS7-201	7779	642aa	ENSBTAP00000011251.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BIS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000068649.3	SOCS7-202	7677	608aa	ENSBTAP00000062973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M426	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 7,779 bps, Translation length: 642 residues

Version

ENSBTAT00000011251.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.