Transcript: ENSBTAT00000010688.6 CHD5-201

Description

chromodomain helicase DNA binding protein 5 [Source:VGNC Symbol;Acc:VGNC:59327]

Location

About this transcript

This transcript has 42 exons, is annotated with 88 domains and features and is associated with 7000 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000010688.6	CHD5-201	6301	1954aa	ENSBTAP00000010688.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MFF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000077250.3	CHD5-202	6191	1951aa	ENSBTAP00000063469.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5B6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 42, Coding exons: 41, Transcript length: 6,301 bps, Translation length: 1,954 residues

Version

ENSBTAT00000010688.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.