Transcript: ENSBTAT00000005923.7 SLX4-202

Description

SLX4 structure-specific endonuclease subunit [Source:VGNC Symbol;Acc:VGNC:34973]

Location

About this transcript

This transcript has 15 exons, is annotated with 49 domains and features, is associated with 2561 variant alleles and maps to 12 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000127792.1	SLX4-201	6200	1754aa	ENSBTAP00000095967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TG10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSBTAT00000005923.7	SLX4-202	6116	1753aa	ENSBTAP00000005923.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N7Q0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 6,116 bps, Translation length: 1,753 residues

Version

ENSBTAT00000005923.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.