Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Gene tree
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- GO: Anatomical entity
Phenotypes
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Molecular interactions
External references
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ID History
- Gene history

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Gene: TRAIP ENSBTAG00000004877

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Description

TRAF interacting protein [Source:VGNC Symbol;Acc:VGNC:36280]

Location

Primary_assembly 22: 50,396,748-50,417,063 forward strand.

ARS-UCD2.0:CM008189.2

About this gene

This gene has 3 transcripts (splice variants) and 197 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000006411.6	TRAIP-201	2330	518aa	ENSBTAP00000006411.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R8Z4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000062935.3	TRAIP-202	1057	282aa	ENSBTAP00000054002.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QQB7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000110196.1	TRAIP-203	964	285aa	ENSBTAP00000075414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RWC0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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