Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBAC1 ENSBTAG00000039851

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Description

UBA domain containing 1 [Source:VGNC Symbol;Acc:VGNC:36567]

Location

Primary_assembly 11: 103,462,732-103,481,791 reverse strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 5 transcripts (splice variants), 200 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000098028.1	UBAC1-204	1919	458aa	ENSBTAP00000079262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S2J4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000083464.2	UBAC1-205	2372	422aa	ENSBTAP00000072510.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MMU6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000033827.5	UBAC1-201	1755	402aa	ENSBTAP00000033736.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0VBZ2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000092361.1	UBAC1-202	1704	385aa	ENSBTAP00000092209.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T6J9	-
ENSBTAT00000130445.1	UBAC1-203	1668	373aa	ENSBTAP00000094956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TAB0	-

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Summary

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