Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SEC31A ENSBTAG00000020525

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Description

SEC31 homolog A, COPII coat complex component [Source:VGNC Symbol;Acc:VGNC:34417]

Location

Primary_assembly 6: 97,653,827-97,713,856 reverse strand.

ARS-UCD2.0:CM008173.2

About this gene

This gene has 6 transcripts (splice variants), 207 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000108265.1	SEC31A-201	4880	1253aa	ENSBTAP00000089851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000067522.2	SEC31A-202	4826	1235aa	ENSBTAP00000062298.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N0N9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000119373.1	SEC31A-203	4802	1227aa	ENSBTAP00000076000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RXY5	-
ENSBTAT00000104808.1	SEC31A-204	4718	1199aa	ENSBTAP00000098780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQT0	-
ENSBTAT00000124110.1	SEC31A-205	4445	1108aa	ENSBTAP00000080694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S9U0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000027346.7	SEC31A-206	4281	1202aa	ENSBTAP00000027346.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BMP2	-

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Summary

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