Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CARM1 ENSBTAG00000012048

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Description

coactivator associated arginine methyltransferase 1 [Source:VGNC Symbol;Acc:VGNC:26767]

Location

Primary_assembly 7: 15,320,284-15,363,641 forward strand.

ARS-UCD2.0:CM008174.2

About this gene

This gene has 5 transcripts (splice variants), 218 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000071536.3	CARM1-201	3428	626aa	ENSBTAP00000059771.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MWG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000121867.2	CARM1-204	3273	555aa	ENSBTAP00000079232.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S7E8	-
ENSBTAT00000083523.3	CARM1-205	3194	548aa	ENSBTAP00000067176.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N883	-
ENSBTAT00000068821.3	CARM1-203	3182	592aa	ENSBTAP00000069195.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NCQ2	-
ENSBTAT00000015985.8	CARM1-202	3007	585aa	ENSBTAP00000015985.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MBG0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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