Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TRIM25 ENSBTAG00000009948

.

Description

tripartite motif containing 25 [Source:VGNC Symbol;Acc:VGNC:36322]

Location

Primary_assembly 19: 7,676,446-7,737,320 reverse strand.

ARS-UCD2.0:CM008186.2

About this gene

This gene has 4 transcripts (splice variants), 128 orthologues and 73 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000013121.6	TRIM25-202	2378	631aa	ENSBTAP00000013121.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QLA8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000071265.2	TRIM25-204	2382	599aa	ENSBTAP00000057179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LQE2	-
ENSBTAT00000074626.2	TRIM25-203	2327	614aa	ENSBTAP00000069807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NE22	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000086002.2	TRIM25-201	1774	581aa	ENSBTAP00000058104.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LSP2	-

.

Summary

.

.