Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: BOP1 ENSBTAG00000009811

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Description

BOP1 ribosomal biosis factor [Source:VGNC Symbol;Acc:VGNC:26540]

Location

Primary_assembly 14: 633,867-656,976 forward strand.

ARS-UCD2.0:CM008181.2

About this gene

This gene has 6 transcripts (splice variants) and 182 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000099417.2	BOP1-201	2554	806aa	ENSBTAP00000075382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RTS3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000096046.2	BOP1-204	3412	784aa	ENSBTAP00000081676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S8S5	-
ENSBTAT00000094228.2	BOP1-203	3197	734aa	ENSBTAP00000089269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SYD4	-
ENSBTAT00000097904.2	BOP1-202	2713	706aa	ENSBTAP00000076452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RVS9	-
ENSBTAT00000012938.8	BOP1-205	2197	713aa	ENSBTAP00000012938.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MRX4	-
ENSBTAT00000132588.2	BOP1-206	2175	676aa	ENSBTAP00000090852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SWK1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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