Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIM2 ENSBTAG00000008816

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Description

tripartite motif containing 2 [Source:VGNC Symbol;Acc:VGNC:36318]

Location

Primary_assembly 17: 4,309,174-4,437,193 reverse strand.

ARS-UCD2.0:CM008184.2

About this gene

This gene has 7 transcripts (splice variants), 274 orthologues and 73 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000115952.2	TRIM2-204	6624	821aa	ENSBTAP00000095350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TEI3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000133963.1	TRIM2-206	6548	771aa	ENSBTAP00000099600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TQL8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000011609.7	TRIM2-201	6319	765aa	ENSBTAP00000011609.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6YT52	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000094957.1	TRIM2-205	6280	703aa	ENSBTAP00000078440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S3S4	-
ENSBTAT00000115211.1	TRIM2-202	6188	655aa	ENSBTAP00000100393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TPR9	-
ENSBTAT00000096829.1	TRIM2-203	5378	374aa	ENSBTAP00000097502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKM6	-
ENSBTAT00000115122.1	TRIM2-207	661	154aa	ENSBTAP00000077610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9RYC3	-

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Summary

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