Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PABPC1 ENSBTAG00000046358

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Description

poly(A) binding protein cytoplasmic 1 [Source:VGNC Symbol;Acc:VGNC:53870]

Location

Primary_assembly 14: 63,625,775-63,658,986 forward strand.

ARS-UCD2.0:CM008181.2

About this gene

This gene has 5 transcripts (splice variants), 169 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000064237.4	PABPC1-201	2827	636aa	ENSBTAP00000056644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P61286	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000078771.3	PABPC1-205	2839	577aa	ENSBTAP00000061371.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVE7	-
ENSBTAT00000104421.2	PABPC1-202	2794	625aa	ENSBTAP00000079246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S074	-
ENSBTAT00000132802.2	PABPC1-203	2716	599aa	ENSBTAP00000088943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SZY1	-
ENSBTAT00000099768.2	PABPC1-204	2689	590aa	ENSBTAP00000096879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TKS9	-

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Summary

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