Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: NOD1 ENSBTAG00000038235

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Description

nucleotide binding oligomerization domain containing 1 [Source:VGNC Symbol;Acc:VGNC:32150]

Location

Primary_assembly 4: 65,822,432-65,911,847 forward strand.

ARS-UCD2.0:CM008171.2

About this gene

This gene has 5 transcripts (splice variants), 202 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000061183.5	NOD1-203	4582	954aa	ENSBTAP00000053171.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B7V7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000106537.2	NOD1-202	4510	930aa	ENSBTAP00000080894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9S4N5	-
ENSBTAT00000079765.3	NOD1-204	4498	926aa	ENSBTAP00000071546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBT5	-
ENSBTAT00000067252.3	NOD1-205	4498	926aa	ENSBTAP00000063184.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LZU6	-
ENSBTAT00000113733.2	NOD1-201	3518	934aa	ENSBTAP00000090549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SVN1	-

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Summary

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