Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIP12 ENSBTAG00000021653

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Description

thyroid hormone receptor interactor 12 [Source:VGNC Symbol;Acc:VGNC:36358]

Location

Primary_assembly 2: 117,811,397-117,962,784 reverse strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 7 transcripts (splice variants), 217 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000099853.1	TRIP12-203	6881	2068aa	ENSBTAP00000101407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TW48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000116020.1	TRIP12-206	6852	2026aa	ENSBTAP00000086799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SS51	-
ENSBTAT00000038151.5	TRIP12-202	6754	2067aa	ENSBTAP00000037967.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAF6ZDJ0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000104652.1	TRIP12-204	6701	2008aa	ENSBTAP00000079879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SCB6	-
ENSBTAT00000107993.2	TRIP12-207	6657	2038aa	ENSBTAP00000101086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TWW7	-
ENSBTAT00000071197.2	TRIP12-205	6635	1967aa	ENSBTAP00000064519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M409	-
ENSBTAT00000128694.1	TRIP12-201	5510	1722aa	ENSBTAP00000083346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9SHX4	-

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Summary

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