Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL4A4 ENSBTAG00000021310

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Description

collagen type IV alpha 4 chain [Source:VGNC Symbol;Acc:VGNC:50083]

Location

Primary_assembly 2: 115,161,378-115,317,902 reverse strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 4 transcripts (splice variants), 177 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000093056.1	COL4A4-203	6453	1689aa	ENSBTAP00000085661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000090247.1	COL4A4-202	6265	1602aa	ENSBTAP00000081785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000018302.7	COL4A4-201	6262	1612aa	ENSBTAP00000018302.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MJ71	-
ENSBTAT00000122262.1	COL4A4-204	5859	1551aa	ENSBTAP00000076073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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